Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSINYDELMQPVLAFLGCQTPKEWLDEAVNNLDILMQDHANCEKKAAGTAMNLMFRYSFFTDLQVKLAQLVREEMLHYEQVLEFMTKRG------QEWKGLSAGRYAGGLRKEIRTYEPEALIDVLVIGAFVEARSCERFYAL-APCVDDELGRYYRYLLKSESRHFEDYLALALDVAKTAKMKDPEEDIQQRIEHIREVEKNLILTPDDTFRFHSGIPA
3Q4O Chain:A ((23-191))----------------------------PISEEEKEGLIEMREEEKLARDVYLTLYNKW----KLQIFKNIAESEQTHMDAVKYLLEKYNIPDPVKNDSIGVFSNPKFEELYKKLVEKGDKSEVDALKVGATIEDLDIADLEKWINKTDNEDIKFVYENLMKGSRNHMRAFVRMLNNYGSNYTPQYISKEEYEEIISSSTE--------------------


General information:
TITO was launched using:
RESULT:

Template: 3Q4O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 724 23090 31.89 142.53
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 31.89
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.388

(partial model without unconserved sides chains):
PDB file : Tito_3Q4O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3Q4O-query.scw
PDB file : Tito_Scwrl_3Q4O.pdb: