Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTDKFSRWSTLFSQNLSRDWKKILIWLVGVTAFSGGFVPAFEELTSGQGLAGLYETLQNPAMIAMVGPTPASNAAEYTLGAMYANEMLLFCSLFAAVISVLHVVSQTRKKEELGLIELIRSFRVGRQANSLAVIAESILINLLLAISISCTMIFFQADSITAEGAWLFGLSVGSMGILGSAVALFAAQLMPSSASSNGLSLAFLGGLYLLRAITDVADSSLSMWNPLGWSYLTYPFTTNNWIPLLYLFLFSLILIISSFVLEEHRDLNTGYIPEREGKPYAKRSLLSLRGLLFYLNKGMTISWLITFGLMGAAYGSIYGNMQQFLESNDLMKQMFIQSGVSIEKNFTSTIMVVLICLAAILPIASINRLFTEETHGRMNQLFATKI-SRNQLYWTNMLLAILFAILAILISSGALGLSALASMKDAK-DMDLLMFLKAGFNFLPAVLVFIGISGFLFGWLPRIGK----LAYIYLAYSFALNYFGGILDLPEWFS---KTAVPSWVPRMPN----DSF----------------------------DLSVFLTLSCISLALFVLGSIGYRRRDLLEG
5DO7 Chain:B ((471-670))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKCYSERAMLYYELEDGLYTTGPYFFAKILGELPEHCAYI--IIYGMPTYWL-----ANLRPGLQPFLLHFLLVWLVVFCCRIMALAAAALLPTFHMASFFSNALYNSFYLAGGFMINLSSLWTVPAWISKVSFLRWCFEGLMKIQFSRRTYKMPLGNLTIAVSGDKILSVMELDSYPLYAIYLIVIGLSGGFMVLYYVSLRFIKQK--


General information:
TITO was launched using:
RESULT:

Template: 5DO7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 441 -72890 -165.28 -458.42
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.46

3D Compatibility (PKB) : -165.28
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.46
QMean score : 0.206

(partial model without unconserved sides chains):
PDB file : Tito_5DO7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DO7-query.scw
PDB file : Tito_Scwrl_5DO7.pdb: