Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEADALS----PVGLGLLLLPFLVTLLAALCVRCRELPVSYDSTSTESLYPRSILIKP-------PQITVPRTPAVSYPLVTSF-------PPLRQPDLLPIPRSPQPLGGSHR---MPSSQQNSDDANSVA----SYENQEPACKNVDADEDEDDYPNGYLVVLPDSSPAAVPVVSSAPVPSNPDLGDSAFSVESCEDYVNVPESEESAEASLDGSREYVNVSPEQQPVTRAELASVNSQEVEDEGEEEGVD-GEEAPDYENLQELN--
4RL8 Chain:A ((3-269))-EVDPGDYEALPVGATIGVVYYQHSTTDSAYANGHKVSSDFKLTSNVGILRLLHVYQLTDRLTLEPQFLLPFGRVSSSGDASALGDTSGVGDLTLTAPLKYRLNEANDILGATVYLTAPTGNYNRDDALNLGENRWKVDLQAAYVKHLGEKWAVDLVGDAIWYSDNDDFGSSSARREQDVSYGAQLMGRYIVDPG--TSLAIGLGHTWGGENQIDGTAQDDRAETTNFRVTANKFFTAKDQLQMQLGRDLAVENGPKENFRLNLRYVRVF


General information:
TITO was launched using:
RESULT:

Template: 4RL8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1118 65451 58.54 273.85
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 58.54
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.65
QMean score : -0.125

(partial model without unconserved sides chains):
PDB file : Tito_4RL8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RL8-query.scw
PDB file : Tito_Scwrl_4RL8.pdb: