Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR
4D6V Chain:A ((2-313))-AEHLMFKGNLAGHNGWVTAIATSSENPDMILTASRDKTVIAWQLTREDNLYGFPKKILHGHNHFVSDVAISSDGQFALSSSWDHTLRLWDLNTGLTTKKFVGHTGDVLSVSFSADNRQIVSASRDRSIKLWNTLGECKFDIVEDGHTEWVSCVRFSPNPALPVIISAGWDKTVKVWELSNCKLKTTHHGHTGYLNTLAVSPDGSLAASGGKDGITMLWDLNEGKHLYSLDAGDVINALVFSPNRYWLCAATASSIKIFDLESKSLVDDLQPDFDGLSDKARKPECTSLAWSADGQTLFAGFSDNLVRVWAVV----


General information:
TITO was launched using:
RESULT:

Template: 4D6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1969 -180837 -91.84 -579.60
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.93

3D Compatibility (PKB) : -91.84
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.93
QMean score : 0.581

(partial model without unconserved sides chains):
PDB file : Tito_4D6V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D6V-query.scw
PDB file : Tito_Scwrl_4D6V.pdb: