Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------------------------MKKSSILF-------------IFILLLCIGLQYETIYYTDGSRSGAEYGLMGVSIFLALFYMIPALYFLFR--IGKKWELPKKVLILSLLGGMFLSGWLSSFANTYIHDLLGVLFPDSPFLNAFESAIVAPLVEEPLKLLPLVFVLALIPVRKLKFL--FLLGIASGLGFQMIEDI-------GYIR------------TDLPEGFDFT--ISRILERI--ISGIAS---------------HWTFSG----LAVVG---VYLL-----YRAY--KGQKV-GKKQGLIV
5I5H Chain:A ((246-572))YPLSELRYRDMGTGQNVLLITVDGLNYSRFEKQMPALAGFAEQNISFTRHMSSGNTTDNGIFGLFYGISPSYMDGILSTRTPAALITALNQQGYQLGLFSSDGFTSPLYRQALLSDFSMPSVRTQSDEQTATQWINWLGRYAQEDNRWFSWVSFNGTNIDDSNQQAFARKY-SRAAGNVDDQINRVLNALRDSGKLDNTVVIITAGRGIPLSEEEETFDWSHGHLQVPLVIHWPGTPAQRINALTDHTDLMTTLMQRLLHVSTPASEYSQGQDLFNPQRRHYWVTAADNDTLAITTPKKTLVLNNNGKYRTYNLRGERVKDEKPQLSL


General information:
TITO was launched using:
RESULT:

Template: 5I5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1052 -48161 -45.78 -220.92
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -45.78
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.130

(partial model without unconserved sides chains):
PDB file : Tito_5I5H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5I5H-query.scw
PDB file : Tito_Scwrl_5I5H.pdb: