Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENLKKMAGIKAAEFVSDGMVVGLGTGSTAYYFVEEIGRRIKE-EGLQITAVTTSSVTTKQAEGLNIPLKSIDQVDFVDVTVDGADEVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDESKLVEKLG-AFKLPVEVVQYGAEQVFRHFERAGYKPSFR---EKDGQRFVTDMQNFIIDLALDVIENPIAFGQELDHVVGVVEHGLFNQMVDKVIVAGRDGVQISTSKKGK
1LK7 Chain:D ((3-225))VEEMKKIAAKEALKFIEDDMVIGLGTGSTTAYFIKLLGEKLKRGEISDIVGVPTSYQAKLLAIEHDIPIASLDQVDAIDVAVDGADEVDPNLNLIKGRGAALTMEKIIEYRAGTFIVLVDERKLVDYLCQKMPVPIEVIPQAWKAIIEELSIFNAKAELRMGVNKDGP-VITDNGNFIIDAKFPRIDDPLDMEIELNTIPGVIENGIFADIADIVIVGTREGVK--------


General information:
TITO was launched using:
RESULT:

Template: 1LK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1278 -10283 -8.05 -47.17
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain D : 0.82

3D Compatibility (PKB) : -8.05
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.395

(partial model without unconserved sides chains):
PDB file : Tito_1LK7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LK7-query.scw
PDB file : Tito_Scwrl_1LK7.pdb: