Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------MSRLLVIGCGGVAQV---AISKICQDSETFTEIMIASRTKSKCDDLKAKLEGKTSTKIETAALDADKVEEVIALIGSYKPEAVLNVALPYQDLTIMDACLATGVHYIDTANYEAEDTEDPEWRAIYEKRCKELGFTAYFDYSWQWAYQEKFKEAGLTALLGSGFDPGVTSVFSAYALKHYFDEIH-------------------YIDILDCNGGDHGYP--------FATNFNPEINLREVSAPGSYWEDGK-------------------WVEVEAMSI-KREYDFPQVGQKDMYLLHHEEIESLAKNIPGV--KRIRFFMTFGQSYLTHMKCLENVGLLRTDTINFNGQEIVPIQFLKALLPDPASLGPRTVGKTNIGCIF-TGVKDGVEKTIYIYNVCDHQECYAEVGSQAISYTTGVPA-MIGTKLVMNGTWKQAGVYNLEELDPDPFMEALNEYGLPWVVVE--------------------NPQMVD-------
2PH5 Chain:A ((6-474))NTKKILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVD-------VAQQYGVSFKLQQITPQNYLEVIGSTLE-ENDFLIDVSIGISSLALIILCNQKGALYINAATEPWKERRT--------------------NYSLREEVLRLKDKTQKTALITHGANPGLVSHFIKEALLNIAKDNGLTINRPKNAAEWANLAMTLGIKVIHVAEQDSQVTYPPKSPGEFVNTWSANGLILEGLQPAEIGWGTHEAHWPHDAYSHSNGPQCAIYLSRPSAGVMVRSW-TPTLGAFHGFLITHAETISLTNFLTLKNGSELLYRPTVHYAYNPCPDARLSIFELKSNEWKPQNKNRLILNEIID-------------GCDELGVLLMGNQRG----AYWYGSTLSIQEARQIAPYNNATSLQVVASMISGIIWAIEH--PDEGIVEPEEVDHQYIIDIAKPYLGKVGGYYTDWTPLKNRGELYPEEVDLSDPWQFFNIRVNLE


General information:
TITO was launched using:
RESULT:

Template: 2PH5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1919 439 0.23 1.18
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 0.23
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.352

(partial model without unconserved sides chains):
PDB file : Tito_2PH5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PH5-query.scw
PDB file : Tito_Scwrl_2PH5.pdb: