Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVPKTATSTETKTITRIIHYVDKVTNQNVKEDVVQPVTLSRTKTENKVTGVV-TYGEWTT-------GNWDEVISGKIDKYKDPDIPTVESQEVTSDSSDKEITVRYDRLSTPEKPIPQPNPEHPSVPTPNPELPNQETPTPDKPTPEPGTPKTETPVNPDPEVPTYETGKREELPNTGTEANATLASAGIMTLLAGLGLGFFKKKEDEK
4MT5 Chain:A ((83-182))--------AEQKTVTETIHYVDENN-QTVQPDSTTAVTFKRGYTTDNVTGKVVSYDPWTVDGNQADSKTFAAVPSPAVEGYT-PNHQQINEFTVTPDSKDIVKTVVYVGD----------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4MT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 296 12265 41.44 133.32
target 2D structure prediction score : 0.37
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 41.44
2D Compatibility (Sec. Struct. Predict.) : 0.37
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.406

(partial model without unconserved sides chains):
PDB file : Tito_4MT5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MT5-query.scw
PDB file : Tito_Scwrl_4MT5.pdb: