Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----MWIAISALNLAFAVMLGAFGAHGLKAHASPEQLAWWQTATDYFFYHALG----LLALGIL----SKVLPHFPIKLSFLLIQIGILFFCGSLYIMALGLPRILGAITPIGGALMIAGW-----LILAWNAFKYAK
4MTM Chain:A ((28-164))IPTATSTTAGITKVLNVLNSNDVGSALSAAQGKVLNDKFNFQNSKNQSGYVRLGDSGLIIQWGVFTSTKTQSNLIFPLAFPNALLSITGNLNSNTPDVIGIDFDLSTATKTSIKTGAAQVGASWLSGKKISWIAIGY--


General information:
TITO was launched using:
RESULT:

Template: 4MTM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 333 -32982 -99.05 -277.16
target 2D structure prediction score : 0.14
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -99.05
2D Compatibility (Sec. Struct. Predict.) : 0.14
1D Compatibility (Hydrophobicity) : 0.62
QMean score : -0.039

(partial model without unconserved sides chains):
PDB file : Tito_4MTM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MTM-query.scw
PDB file : Tito_Scwrl_4MTM.pdb: