Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTDINDYEDAEDSAVDEDEAKAAESGAADEEAGNLTDADLAEAETLTVTAKQKQRQALEDEVAAFLARGGRITEVPPDEHSDR
5FMR Chain:B ((71-109))----------------------------------------------------KFTAPEVDMLKKFVKNGGSILI---------


General information:
TITO was launched using:
RESULT:

Template: 5FMR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 18 -3795 -210.81 -172.48
target 2D structure prediction score : 0.77
Monomeric hydrophicity matching model chain B : 0.64

3D Compatibility (PKB) : -210.81
2D Compatibility (Sec. Struct. Predict.) : 0.77
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.940

(partial model without unconserved sides chains):
PDB file : Tito_5FMR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FMR-query.scw
PDB file : Tito_Scwrl_5FMR.pdb: