Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTETTIQGLAASLNPARAARKIIGFVPTMGNLHEGHLTLVREAKKLCDVVVVSIFVNPTQFGPGEDFDNYPRTLEQDSRLLADVGCDIIFAPSVEQMYGTQPRLTNISVSQITDDLCGSSRPGHFDGVALVVTKLFNIVQPNYAFFGQKDYQQLAVIRQFVQDLNIPLEVIGVPIVRAEDGLALSSRNGYLTPEQRQVAPVIYQGLKQAEEQLHQG----KDLQQVLADLKTLLTDNGFVVDYVEARQPNLLA-ASQFDRDIVLFVAAKLGGTRLIDNLQVAFTPQ
5UCR Chain:B ((27-282))-----------------------VAFVPTMGNLHEGHLALVREARKRADNVVVSIFVNRLQ----------PRTLQQDADKLAAEGVAVVFAPDEKELYPNVEQRYNVEPPHLQNELCGKFRPGHFRGVATVVSKLFNIVLPDVACFGKKDYQQLAVIKGLTEDLNFDIEIVPVDTGRAADGLALSSRNRYLSVGERAEAPRLYRELQAVAESLKQGGLDYAGLERQAAD---HLTAAGWLVDYVEIRRADTLEMARAGDKKLVVLAAARLGTTRLIDNVEV-----


General information:
TITO was launched using:
RESULT:

Template: 5UCR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1154 -111658 -96.76 -463.31
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -96.76
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.575

(partial model without unconserved sides chains):
PDB file : Tito_5UCR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5UCR-query.scw
PDB file : Tito_Scwrl_5UCR.pdb: