Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MISLSDLRKFKAEGRKFSCLTCYDASMAKAMELAEIDTILIGDSLGMAIQGRDSTLPVTVEDMAYHTAAVRRGNQHALIMTDLPFMSYATLKDALQNAKTVMQAGAQMIKIEGGAWLSETVQVLTRNGVPVCVHLGLTPQSVHVFGGYKLQARTREAADQLIADCTAVVEAGAAVLLLECVPAQLGQEIAELFPNTPVIGIGAGNATDGQVLVVQDMLGLTFGRVARFVRNFMKEQSGETAILDAFKAFHAAVQDQSFPAKEHTFQVEL 3VAV Chain:E ((16-275)) -VTVPKLQAMREAGEKIAMLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGTPADAFASAVKLMRAGAQMVKFEGGEWLAETVRFLVERAVPVCAHVGLTPQS------------TEAGAAQLLRDARAVEEAGAQLIVLEAVPTLVAAEVTREL-SIPTIGIGAGAECSGQVLVLHDMLGVFPGKRPRFVKDFMQ---GQPSIFAAVEAYVRAVKDGSFPGPEHSF----

General information: TITO was launched using: RESULT: Template: 3VAV.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 1466 -210609 -143.66 -849.23 target 2D structure prediction score : 0.71 Monomeric hydrophicity matching model chain E : 0.86 3D Compatibility (PKB) : -143.66 2D Compatibility (Sec. Struct. Predict.) : 0.71 1D Compatibility (Hydrophobicity) : 0.86 QMean score : 0.626

(partial model without unconserved sides chains): PDB file : Tito_3VAV.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3VAV-query.scw PDB file : Tito_Scwrl_3VAV.pdb: