Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALIRKRRLTEQQQRRIEKQHKTRQEEVDTSQDLDGLVVQHYGRQLEVQALSVPAHHPEKPQVAEGEPEPFWKPIELNSVWRCHTRTNLELLVTGDRVKWQADPNTGLGIITAIHPRTSLLTRPDRYHKVKPVAANIS-LIVIVFAPLPEPAPTLIDRYLVACADANIPALLVLNKSDLLTENNPILDMLKEYENLG---YEVMICHSKGD--ISALSQRLDGETVAFVGQSGVGKSSLINVLIPDAEQKTNIISENSALGQHTTTSTRLINFGRNGALIDSPGIREFGLWHLDLDKIRMGFPEIEAHLGSCQFRNCTHTHEKNCGLKQAVEAGEILPRRLDSFLRLIDEIQEAQQKN
1U0L Chain:B ((46-299))---------------------------------------------------------------------------------------NLKIYV-GDRVEYTPDE-TGSGVIENVLHRKNLLT--------KPHVANVDQVILVVTVKMPETSTYIIDKFLVLAEKNELETVMVINKMDLYDEDD--LRKVRELEEIYSGLYPIVKTSAKTGMGIEELKEYLKGKISTMAGLSGVGKSSLLNAINPGLKLR-------------TTTTAQLLKFDFGGYVVDTPGFANLEINDIEPEELKHYFKEFGDK--QCFFSDCNHVDEPECGVKEAVENGEIAESRYENYVKMFYELLGRR---


General information:
TITO was launched using:
RESULT:

Template: 1U0L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1139 9822 8.62 41.79
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain B : 0.75

3D Compatibility (PKB) : 8.62
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.571

(partial model without unconserved sides chains):
PDB file : Tito_1U0L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1U0L-query.scw
PDB file : Tito_Scwrl_1U0L.pdb: