Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKPNDVVSNLLNNPTPNTHASVDSAQQEQQAGLDFVRQVITDDLAAGRAKQIVTRFPPEPNGYLHIGHVKAICLNFGVAEEFNGLCNLRFDDTNPDAEEQEYVDGIANDVKWLGFS-WNGEPRYASGYFDQLYAWAIQLIEQGDAYVDLQSPEEIKLNRGSFVE--PGKN---SPYRDASVEENLARFEKMRNGELKEGEAVLRAKIDMASPNVHMRDPILYRVLHSEHHQTGDKWKIYPMYDYAHPLSDAIEGITHSLCTLEFQDHRPFYDWIVEKVKPKAVPHQYESSRLNVDYTITSKRKLRKLVEGGYVNGWDDPRMPTVVGMRRRGFTPEGLRDFCKRVGVSKTDGIVDVAMLEFCIRQSLENTAARGMAVLNPLKVTLTNLPED---LDLTHARHPNVDMGERVIPLTKEIYIDRKDFEE-VPPKGFKRLIPD---GEVRLRHAYVIKCDEVIKDANGEVVELKCSIDPDTLGKNPEGRKVKGVIHWV--SATKGIP---AEVRIYDRLFTEADPETG-DDFLANLNPDSLKVV-QAVIEPALA------------------------QAKPEDRFQFEREGYFVADQYDHTPEKPVFNRVLDLKDSFKPEKK
4H3S Chain:A ((251-806))--------------------------------------------------KVRTRFPPEPNGYLHIGHSKAIMVNFGYAKYHNGTCYLRFDDTNPEKEAPEYFESIKRMVSWLGFKPW--KITYSSDYFDELYRLAEVLIKNGKAYVCHCTAEEIKRGRGI---GTPGGERYACKHRDQSIEQNLQEFRDMRDGKYKPGEAILRMKQDLNSPSPQMWDLIAYRVLNAPHPRTGTKWRIYPTYDFTHCLVDSMENITHSLCTTEFYLSRESYEWLCDQVHV-FRPAQREYGRLNITGTVLSKRKIAQLVDEKFVRGWDDPRLFTLEAIRRRGVPPGAILSFINTLGVTTSTTNIQVVRFESAVRKYLEDTTPRLMFVLDPVEVVVDNLSDDYEELATIPYRPGTPEFGERTVPFTNKFYIERSDFSENVDDKEFFRLTPNQPVGLIKVSHTVSFKSLE--KDEAGKIIRIHVNYD-NK-------KKPKTYIQWVPISSKYNSPLRVTETRVYNQLFKSENPSSHPEGFLKDINPESEVVYKESVMEHNFGDVVKNSPWVVDSVKNSEFYVEEDKDSKEVCRFQAMRVGYFTLDK-ESTTSKVILNRIVSLKDA------


General information:
TITO was launched using:
RESULT:

Template: 4H3S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2472 47856 19.36 95.33
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : 19.36
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.460

(partial model without unconserved sides chains):
PDB file : Tito_4H3S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4H3S-query.scw
PDB file : Tito_Scwrl_4H3S.pdb: