Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPSKAFETLPNIYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKTGATIPWIFEKEGEVGFRTRETVVLNELTSRKALVLATGGGAITQAPNREFLKQRGIVVYLYTPVE---LQLQRTYRDKNRPLLQVENPEQKLRDLLKIRDPLYREVAHYTIETNQGAARDLAQKILQLILSNKLK
2SHK Chain:B ((5-155))-----------IFMVGARGCGKTTVGRELARALGYEFVDTDIFMQHTSGMTVADVVAAEGWPGFRRRESEALQAVATPN-RVVATGGGMVLLEQNRQFMRAHGTVVYLFAPAEELALRLQ----------LTGRPIAEEMEAVLREREALYQDVAHYVVDATQ--------------------


General information:
TITO was launched using:
RESULT:

Template: 2SHK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 614 -58703 -95.61 -425.38
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -95.61
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.452

(partial model without unconserved sides chains):
PDB file : Tito_2SHK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2SHK-query.scw
PDB file : Tito_Scwrl_2SHK.pdb: