Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence ---------MITQNKDILFRSPIMNKLMVYAYTGVVITMLFWGSAFNAM------------SYVIQYMPPLSAAAERFTIASL--------GLFILF-AAIGKLSWAALRQNLVIYLIIGIIGIAGFNLGCFYGLQTTSAV-NGALIMATTPLITLLLTILLDGEKLTLNKFIGV--VFGLSGVLFVISHGHISTLLHLKIAIGDLFILLGGVSFCLANVLSRRYVKNATPLETTTFSMMFGALTL---IILSVIFEHPSQAIAMAPITAHLAMGYVIICSTMIAYLFWFNGIQKLGAGRASIFFNFVPVFSMLVALLAGQSLNIWQLIGTALVMLGVMSSGGFIQIKRPALIAKPCTK 4QNU Chain:A ((1-323)) MIDFGNFYSLIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSNAVEFLPEIKPYRLDLLHSVTAESEEPLSAGQIKRIETLMRNLMPWRKGPFSLYGVNIDTEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAH-----------LAVGIDPTQLFLCQFEAVRKLLGNDQRAHLLPLG-IEQLPALK-AFDTVFSM--GV-----------LYHRRSPLEH--LWQLKDQLVNEGELVLETLVIDGDENTVLVPGDRYAQMRNVYFIPSALALKNWLKKCGFVDIRIADVSVTTTEEQRRT-EWMVTESLADFLDPHDPGKTVE-----GYPAPKRAVLIARKP--

General information: TITO was launched using: RESULT: Template: 4QNU.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1414 -131912 -93.29 -459.62 target 2D structure prediction score : 0.37 Monomeric hydrophicity matching model chain A : 0.63 3D Compatibility (PKB) : -93.29 2D Compatibility (Sec. Struct. Predict.) : 0.37 1D Compatibility (Hydrophobicity) : 0.63 QMean score : 0.116

(partial model without unconserved sides chains): PDB file : Tito_4QNU.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4QNU-query.scw PDB file : Tito_Scwrl_4QNU.pdb: