Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKDIYVEFRGKYKVDGESRDSEHKGWLEVNSWSHNIRQPKSATSSSVGGHTAERVEHSDMVFVKDLDATSPKLWEACSAGYTFDEVQIDFYRANGDKRIKYLQIKLKHVLVSSVTPTVNEEGVPTEAFGLKYAAVEWTYNQQDINGTAKG-AVTKKWSLSNNTASYAA
4W64 Chain:C ((3-168))MKDIYVEFRGKYKVDGESRDSEHKGWLEVNSWSHNIRQPKSATSSSVGGHTAERVEHSDMVFVKDLDATSPKLWEACSAGYTFDEVQIDFYRANGDKRIKYLQIKLKHVLVSSVTPTVNEEGVPTEAFGLKYAAVEWTYNQQDINGT-AKGAVTKKWSLSNNTASYA-


General information:
TITO was launched using:
RESULT:

Template: 4W64.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 723 -33144 -45.84 -200.87
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain C : 0.99

3D Compatibility (PKB) : -45.84
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.99
QMean score : 0.524

(partial model without unconserved sides chains):
PDB file : Tito_4W64.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4W64-query.scw
PDB file : Tito_Scwrl_4W64.pdb: