Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAIQRSGRFERIKKPLKSDMNVVPYIDVMLVLLVIFMVTAPMITSGIKVDLPQANNHPIESKDMPAMVTIGKDGNIYLQYEDYKDNEPLSLEKLESVLSEAQKKAEQ-ENKQLTVLVNGDKTRPYGEVVSLMA-SLQEAGLTQVGLLTEPLK
2JVF Chain:A ((26-81))--------------------------------------------------------------------------------------------ELERALQELEKALARAGARNVQITISAENDEQAKELLELIARLLQKLGYKDINVRV----


General information:
TITO was launched using:
RESULT:

Template: 2JVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 84 4135 49.22 76.56
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : 49.22
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.620

(partial model without unconserved sides chains):
PDB file : Tito_2JVF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JVF-query.scw
PDB file : Tito_Scwrl_2JVF.pdb: