Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTAMLPEWTTACPDWEERIVAKKSLMPCEPLFPQVADVAERIFKELILVDVMGSPKMGDVTLDWVIEFVRAIFGSYNPNTKRRLIREFFLLISKKNTKSTIAAGVMLVALLLNDRLSAELIILAPTKEVADNSFNPIRDFIRADEELSAMINVSEHTKTVTHLGTGATLKVIAAE----SNAAAGKKASIILIDEVWLFGKRANAESMFREAKGGLASRPEGCVIYLSTMSDEVPCGVFKQLLDYARDVRDGIKEDKGFLPLIYEFPKRLVEAGEHLKPEHFYITNPNLGASVDLEYLISEFKKVKDAGEESLRDFLAKHLNIEIGMNLRANRWAGAEYWNKQKHVFGLDQLIEQSDVITIGIDGGGLDDLLGYAVLGRLKKDPRVWWLWNHAWANKIALERRKENIPKYDDFKLEGSLTVVDRVGDDIDQLAAIAKKVYDSGKLNKIGLDPLGLGGLLDGLLEAGIPEESMFAVPQGYKLMSYILTTERKLAEGNLYHAGQQLMTWAAGNARVVMVGNGMRITKQESGVGKIDPLIATFNAVALMSMNPEPTNKEYNVFFV
1RIF Chain:A ((113-263))-----------------------------------------------------------EPHWYQKDAVFEGLV----------NRRRILNLPTSAGRSLIQALLARYYLEN---YEGKILIIVPTTALTTQMADDFVDYRLFSHAMIKKIGGG--ASKDDKYKNDAPVVVGTWQTVVKQPKEWFSQFGMMMNDECHL----ATG-KSISSIISGLN-NCMFKFGLSGSLR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1RIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 723 -77859 -107.69 -529.65
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -107.69
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.400

(partial model without unconserved sides chains):
PDB file : Tito_1RIF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RIF-query.scw
PDB file : Tito_Scwrl_1RIF.pdb: