Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------------MSVVDFSQLPPPNLIKELDFEQILA-------KRKERFISLFPTEQQLQWKEVLERESEPVTKLLEENAYMELILTNQINQDARALLLAFSSGSD----LDHIAISYYGLKRLVITPANPNTVPPTAAVMETDENLKERCILSL-SGLNTAGATNAYKFFAKS-----ADGRVADASIISHEDNPCFLDVYITQHDSTNYE-ASPDLINIVQKALDPEDVRPVGDRPTVHSSKAVPYQIQARLYISQTAENV--------------MLLSVAKKRL-----EKYVENSKKIGQSIRRSAIYAALHVDGV---SRVEILN-LTSDIEISRSQHAFCTSLDIQIGGTE-----------------------------------------------------------------
5A1S Chain:A ((16-448))SDLLRFKIFGMPLPLYAFALITLLLSHFYNAIPTDLVGGFALMFVMGAIFGEIGKRLPIFNKYIGGAPVMIFLVAAYFVYAGIFTQKEIDAISNVMDKSNFLNLFIAVLITGAILSVNRKLLLKSLLGYIPTILAGIVGASLFGIVIGLCFGIPVDRIMMLYVLPIMGGGNGAGAVPLSEIYHSVTGRSREEYYSTAIAILTIANIFAIIFAALLDMVGKKYTWLSGEGELVRKASFKTEDDEKAGQITHRETAVGMVLSTTCFLLAYVVAKKILPSIGGVSIHYFAWMVLIVAALNASGLCSPEIKAGAKRLSDFFSKQLLWVLMVGVGVCYTDLQEIIDALTFANVVIAAIIVVGAVVGAAIGGWLIGFYPIESSITAGLCMANRGGSGDLEVLSACNRMNLISYAQISSRLGGGIVLVIASIVFSMMVLE


General information:
TITO was launched using:
RESULT:

Template: 5A1S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 907 -36491 -40.23 -119.64
target 2D structure prediction score : 0.36
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -40.23
2D Compatibility (Sec. Struct. Predict.) : 0.36
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.091

(partial model without unconserved sides chains):
PDB file : Tito_5A1S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5A1S-query.scw
PDB file : Tito_Scwrl_5A1S.pdb: