Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDAKMNLKQLAGIEAAKFVKDGMIVGLGTGSTAYYMVEEIGRRMREEGLRITGVTTSNATKEQAEKLGIPLKSIDEVPVVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKETIWIVDSSKLVDKLGKFPLPVEVIPYGSQQLLHIFEEKRFQPVLRTDE-----NG-EVLTTDGGHYIIDLHLEVIEQPESLATYLDELVGVVEHGLFLNMVSKVVVGSEKGVEILDAIRRK
3HHE Chain:B ((26-240))-----QLKKMAALKALEFVEDDMRLGIGSGSTVNEFIPLLGERV-ANGLRVTCVATSQYSEQLCHKFGVPISTLEKIPELDLDIDGADEIGPEMTLIKGGGGALLHEKIVASASRAMFVIADETKMVKTLGAFALPIEVNPFGIHA-TRIAIEKAADNLGLSGEITLRMNGDDPFKTDGGHFIFDAFWGRILQPKLLSEALLAIPGVVEHGLFLGLASRAIV---------------


General information:
TITO was launched using:
RESULT:

Template: 3HHE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1157 -104815 -90.59 -501.50
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.81

3D Compatibility (PKB) : -90.59
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.433

(partial model without unconserved sides chains):
PDB file : Tito_3HHE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HHE-query.scw
PDB file : Tito_Scwrl_3HHE.pdb: