Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKGAIFLRPKQQLFITLLVILGALFNNISVSASAFNFSVTPITSENQIDKRKTYFDLQLDPDQEVEVKAELRNDTEKEVKIDISVNSATTNSNVMVEYGKNEIEKDMSLIFDLVDYVSY-PQIVTLKPKSVQTVAFHVRMPNERFDGVLAGGITFQEIQTEKDQTETKDQSLSIENEYTYIIALLMQQTLN------EVAPNLTLH---EVKPDQINARNVILANVQNDQKTYINQVVIETKITKKGHSEVLYQEEKEGLQIAPNTNFSFPTALNGQPLT---PGEYHLTMTVLGNENENGKFSRKKGNTTINYTNQWVFEKDFTIDGKVAKELNTTDVTIKKDNNWIYILVASLFLLFILLCILLFVLRKKEEKEK
2QSV Chain:A ((15-205))-----------------------------------------------------------SMPEDEGVVRLVVNNTDESDLQVAVVSL---------------------------PSFVSLDDRAFRLQAREPRELNLSLAVPRNMPPGMKDEPLVLEVTSPETG----KKA--------VDSVMVSLPLVDNFPALTAAQTGVMELSTYLDMGQLD-GETTKAAIEIRNVGAGPLR-LH---SVTTRN-P-A-LTAVPDRTEIKPGGSTLLRIAVDPQVMKAEGWQSIAADISII-CN--------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2QSV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 724 11143 15.39 62.60
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : 15.39
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.272

(partial model without unconserved sides chains):
PDB file : Tito_2QSV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QSV-query.scw
PDB file : Tito_Scwrl_2QSV.pdb: