Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMESVYRQERKSNRKKGQMMIQKTRVMLYVNDVEMICRFFVEKIGAEISETIELP---------EEFKSIVLSISKELELGVFPKVFVQKF---SPEVLGPPPSLVFFTDE--FETIYENMEEPG-E----ITDNNGILTFNFSDPEGNYFVIGKAESSD
3KOL Chain:A ((7-153))--------SVNSVLAPGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPD--GTILDLFGEPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTR-TGRGVYFYDPDGFMIEIRCDPE--


General information:
TITO was launched using:
RESULT:

Template: 3KOL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 324 -9442 -29.14 -74.35
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -29.14
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.427

(partial model without unconserved sides chains):
PDB file : Tito_3KOL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KOL-query.scw
PDB file : Tito_Scwrl_3KOL.pdb: