Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNMVKKKITIKEVAKLSGVSITTVSLILNGNTEKFSPKTVQKVLAAKEELGYQPDYFARQMITKETKTIGVLVPDITNPFFSTLMRGIEDILYKQNFVTILCNADSDHQKEIEYLAELTRRGVDGFIIATSAVSTDAINENLKKQGRPFIVLDQKKSEGFSDAVRTDDFRGGYLAGMHLLSLGHQTIALVYPENPPENVHARIEGFKSALDVYQIPHDQLILLPTQFSKQGGYQITAELLDSAATGVFALNDELAFGLYRGLEEAGKSIPEDYSIIGYDNIDMCEYIKPKLTTIAQPIFELGQTSAKLLLDRIQFPEKEWEEKRLPVRLEKRFSTAPLK
4RK0 Chain:C ((7-274))-----------------------------------------------------------------SKTIGVIVPDITNPFFAQLIRGIESVLYKENFILILCNADQDVTREHEYLTELIRRSVDGFVIASSEISNQTINETLRAKKIPFIVLDQKKAEGFSDAVLTDDYRGGQLAAKHLQEQRHEQVIVVMPPHAPVNIQQRLKGFCS---VYT---EKVQLIETELSKTGGYQAVPEILKTESTGIFAINDEIAFGLYRGLAEAGKKIPEDYSIIGYDNVDMCEYVSPPLTTIAQPVFQLGQTTATLLLERIHQPAKDWEEQTLPVQLIERFSTAPLK


General information:
TITO was launched using:
RESULT:

Template: 4RK0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1545 -153340 -99.25 -572.16
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain C : 0.81

3D Compatibility (PKB) : -99.25
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.536

(partial model without unconserved sides chains):
PDB file : Tito_4RK0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RK0-query.scw
PDB file : Tito_Scwrl_4RK0.pdb: