Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---MKNMYYPYLRGKQFDLLALKEALSRG---------LLSNKIQPVIEPV----------RDSATLKNVIELFQKKHHPIAVIQNPQVGQFKLFDQHVHSWTVKENSSVVPAQILTPENLSE---------VLDSPPAFLVFDGQHYPKDTEVWK--------QLAGVDSKFLIPDTSRFR-IWLP----ENKIVIRDSFQTR---KHVESYADKTD-----------DFFSDD--------------------------YLFFHADG-------YIGFSDFTIEGSRYFDKGFPSRALAIH---LTYIDAYG--------NIRVKHFVSDSNDSAKDQALKFLEAGDKMKKW------IMRHHHQLLITSG-----MIEL------LALYQQQKFPGLGVLKKWSLMHHLELI-SHLLDHPKDWLKYYSKVQELYEVIQ-------------------------
4MR0 Chain:A ((114-571))TALSVKDYGAVGDGIHDDRQAIQDAIDAAAQGLGGGNVYFPEGTYLVKEIVFLKSHTHLELNEKATILNGINI---KNHPSIVFM---TGLFTDDGAQV-EWGPTEDISYSGGTIDMNGALNEEGTKAKNLPLINSSGAFAIGNSNNVTIKNVTFKDSYQGHAIQIAG--SKNVLVDNSRFLGQALPKTMKDGQIISKESIQIEPLTRKGFPYALNDDGKKSENVTIQNSYFGKSDKSGELVTAIGTHYQTLSTQNPSNIKILNNHFDNMMYAGVRFTGFTDVLIKGNR-FDKKVKGESVHYRESGAALVNAYSYKNTKDLLDLNKQVVIAENIFNIADPKTKAIRVAKDSAEYLGKVSDITVTKNVINNNSKETEQPNIELLRVSDNLVVSENSIFGGKEGIVIEDSKGKITVLNNQFYNLSGKYISFIKSNANGKEPVISDGNFNIVTENGLYKIVTNNLSDKN


General information:
TITO was launched using:
RESULT:

Template: 4MR0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2058 77845 37.83 250.31
target 2D structure prediction score : 0.35
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : 37.83
2D Compatibility (Sec. Struct. Predict.) : 0.35
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.081

(partial model without unconserved sides chains):
PDB file : Tito_4MR0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MR0-query.scw
PDB file : Tito_Scwrl_4MR0.pdb: