Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIQEIKEIIPHRYPMLLIDRVEEMVEGERIVAKKNVTINEPFFQGHFPEEPVMPGVLIVEAMAQAGA-VALLSLEQF-----KGKTAYFGGLDKAKFRKKVTPGDTLYLEVEILKVKASAGIGKGIAKVDGKKVAEAELTFMIG
3ED0 Chain:E ((14-156))--IEHILQILPHRYPMLLVDRITELQANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIA


General information:
TITO was launched using:
RESULT:

Template: 3ED0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 622 -44315 -71.25 -323.47
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain E : 0.84

3D Compatibility (PKB) : -71.25
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.514

(partial model without unconserved sides chains):
PDB file : Tito_3ED0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ED0-query.scw
PDB file : Tito_Scwrl_3ED0.pdb: