Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNDLSEKVIVIMGASSGIGEATTKLLAEKGAKLVIAARREDRLKAIKESLPEA--ELYIQTADVRDFAQVQAVIDLAMEKFGRIDVLYNNAGIMPTAPLVEGHRDEWQNMLDINIMGVLNGISAVLPIMEKQKSGHIISTDSVAGHVVYPDSAVYCGTKFAVRAIMEGLRQEQRQNNIKSTIISPGAVQTELYQTISDKKAALELHEAQKEWGLTSEDIASAVAFAIETPDRMSVSNMIIRPTTQEV
3TFO Chain:B ((4-238))-----DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTCVNPGVV-----------------------IALQPADIARAVRQVIEAPQSVDTTEITIRPT----


General information:
TITO was launched using:
RESULT:

Template: 3TFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1160 -62379 -53.77 -295.63
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain B : 0.82

3D Compatibility (PKB) : -53.77
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.595

(partial model without unconserved sides chains):
PDB file : Tito_3TFO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TFO-query.scw
PDB file : Tito_Scwrl_3TFO.pdb: