Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIFETVVTDVGIEAEVFRKEKIMILFGDEAPETLTDYCYKIELNQVR-KEITCDMKLCFDKQMYVITAVGDVVQTNLNELGHITIKFDGSH---EPELPGTMYVEDKEMPHLRKGTIIKIDQEDQNGGKLYGNHA
2F9H Chain:B ((5-123))---MQATVTEIGKHAIDDS-EKMIILFGETATDTLKQHAVIQSFPEKDQVTLAEGDHLKIGDTNYTITKVGSFANSNLQSIAHSTLIFADAPTDEDDVIRNGVYLTPHQLPKITIGTTIDYLV-------------


General information:
TITO was launched using:
RESULT:

Template: 2F9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 536 -27701 -51.68 -242.99
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain B : 0.73

3D Compatibility (PKB) : -51.68
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.212

(partial model without unconserved sides chains):
PDB file : Tito_2F9H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2F9H-query.scw
PDB file : Tito_Scwrl_2F9H.pdb: