Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKNKVILSISLAAALLFAAGCSANNTTSSSSSTESSKSTSTAESTTASSVDLNALELPQLTKDVAENEDLVEMVTNKGTIKIKLFPEYAPKAVENFMTHAKDGYYNGLTFHRVIKDFMIQGGDPKGDGTGGESIWGEGFETEINNHL-YNIRGALSMARSQDPNSNGSQFFIVQNTDDMHDGLLKDDYPQAIIDAYKNGGYPSLDGHYTVFGQVIEGMDVVDAIANIETDSSDKPKEEVKIDKINILQEAKQK
2B71 Chain:A ((36-191))------------------------------------------------------------------TERGYITIYTNLGDFEVELYWYHSPKTCLNFYTLCEMGFYDNTIFHRVIPNFVIQGGDPTGTGKGGKSIYGEYFEDEINKELKHTGAGILSMSNNG-PNTNSSQFFITLA----------------------P--LPHLDGKHTIFARVSKNMTCIENIASVQTTATNKPIFDLKILRTST-------


General information:
TITO was launched using:
RESULT:

Template: 2B71.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 804 -16805 -20.90 -108.42
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -20.90
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.457

(partial model without unconserved sides chains):
PDB file : Tito_2B71.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2B71-query.scw
PDB file : Tito_Scwrl_2B71.pdb: