Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKNKVILSISLAAALLFAAGCSANNTTSSSSSTESSKSTSTAESTTASSVDLNALELPQLTKDVAENEDLVEMVTNKGTIKIKLFPEYAPKAVENFMTHAKDGYYNGLTFHRVIKDFMIQGGDPKGDGTGGESIWGEGFETEINNHL-YNIRGALSMARSQDPNSNGSQFFIVQNTDDMHDGLLKDDYPQAIIDAYKNGGYPSLDGHYTVFGQVIEGMDVVDAIANIETDS-SDKPKEEVKIDKINILQEAKQK
2A2N Chain:C ((19-176))------------------------------------------------------------------RVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAG-SNTNGSQFFITVV----------------------P--TPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITVK------


General information:
TITO was launched using:
RESULT:

Template: 2A2N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 842 -18177 -21.59 -116.52
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain C : 0.71

3D Compatibility (PKB) : -21.59
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.496

(partial model without unconserved sides chains):
PDB file : Tito_2A2N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2A2N-query.scw
PDB file : Tito_Scwrl_2A2N.pdb: