Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKNKVILSISLAAALLFAAGCSANNTTSSSSSTESSKSTSTAESTTASSVDLNALELPQLTKDVAENEDLVEMVTNKGTIKIKLFPEYAPKAVENFMTHAKDGYYNGLTFHRVIKDFMIQGGDPKGDGTGGESIWGEGFETEINNHL-YNIRGALSMARSQDPNSNGSQFFIVQNTDDMHDGLLKDDYPQAIIDAYKNGGYPSLDGHYTVFGQVIEGMDVVDAIANIETDSSDKPKEEVKIDKINILQEAKQK
2FU0 Chain:A ((5-159))--------------------------------------------------------------------PKSAIIYTTMGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKHFMVQTGDPSGDGTGGESIWGNEFEDEFFDHLNHSKPFMVSMANCG-PNTNGSQFFITTV----------------------P--CPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPLEDIKILNIKIN------


General information:
TITO was launched using:
RESULT:

Template: 2FU0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 820 -18778 -22.90 -121.94
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -22.90
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.513

(partial model without unconserved sides chains):
PDB file : Tito_2FU0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2FU0-query.scw
PDB file : Tito_Scwrl_2FU0.pdb: