Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceWYKPHLSRDQAIALLKDKDPGAFLIRDSHSFQGAYGLALKVATPPPSAQPWKGDPVEQLVRHFLIETGPKGVKIKGCPSEPYFGSLSALVSQH
2Y3A Chain:B ((196-270))WYVGKINRTQAEEMLSGKRDGTFLIRESSQ-RGCYACSVVV---------------DGDTKHCVIYRTATGFGFAE--PYNLYGSLKELVLHY


General information:
TITO was launched using:
RESULT:

Template: 2Y3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 275 -41084 -149.39 -547.78
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.72

3D Compatibility (PKB) : -149.39
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.458

(partial model without unconserved sides chains):
PDB file : Tito_2Y3A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y3A-query.scw
PDB file : Tito_Scwrl_2Y3A.pdb: