Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceCYHGKLSRKAAESLLVKDGDFLVRESATSPGQYVLSGLQGGQAKHLLLVDPEGKVRTKDHVFDNVGHLIRYH
1MIL Chain:A ((9-80))WFHGKLSRREAEALLQLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYH


General information:
TITO was launched using:
RESULT:

Template: 1MIL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 250 -30511 -122.04 -423.76
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.92

3D Compatibility (PKB) : -122.04
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.92
QMean score : 0.641

(partial model without unconserved sides chains):
PDB file : Tito_1MIL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1MIL-query.scw
PDB file : Tito_Scwrl_1MIL.pdb: