Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceLCVHFSRFMMMKSYRPPASFQQGRYIPNKVLGTGTYGQVIRCYDTVMGKDVAVKVAQSDAAYRRSALNEISALLCLKENEDSVNILDSFED------AGHVCIVSELLDRNLFEVLRNR--GFGPLSLREVRQVALRVLSALASLHNSGYIHCDIKPENIMLRRSTPVSSDSSSPMLGPFTSENASSRSSNKSGEQNNFPNALAPGQEALKLDTNANVHNQLWRNTSSIDSLVGSTHSAAFQDGDLNMGFSPRTGNRLGGYSKQQHGQRGSGDATASISGAGMRHSGSLDGLFGMPAAAVGASGTGNNTRNDLRVNRNTLGNKDSESQERTQFNPDANPYCRTCLIDFGAVRRFNE--NTYYDVQSLWYRAPEVVCGL-PYTTAIDSWSVGCVLFELFTGKPLFPGESLQHQLSLIVQHVGHPSQAALTLGCLATQFQLPMVYMSHDARREHVRQWILSSREAGLQRWRKHQMQKLQEAHIAGNQPLWSHPTADVPSTKSEEDALLTATPYGESDVDGASEELELLVDLVCDLLNPDESQRLSCTQALRHPFLNNASKCRSAAPCPCTATPAACFPAVSAAPAPMPCIMATTTTVQPVMMTASPLSVPMGCSPASPFVMHPVHSAPAATVPFTVAPLESMVGVEMEVSTLGVSSQHQPPQAFSTYPAVAASTVYTTNSTGQVMQCTVPVFTQVTHQVAPNVGHAFLPLGMTAQNPAGGTYCSPTTTASQQQYPPSGMSISPTFSPRGALVHAHVPLGFTPTTASNPAAVAAPAASVQPLGASSYVLASAGTVPCMHDYHSEMASAGMSPYVLCHFQPPHACATVMSP
1J1B Chain:B ((53-346))---------------------EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP--NY----------------T-------EFKFPQIKA--------------------------------------HPWTK---VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1J1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1359 -29649 -21.82 -104.77
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.59

3D Compatibility (PKB) : -21.82
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.491

(partial model without unconserved sides chains):
PDB file : Tito_1J1B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1J1B-query.scw
PDB file : Tito_Scwrl_1J1B.pdb: