Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDIKLKDFEGPLDLLLHLVSKYQMDIYDVPITEVIEQYLAYVSTLQAMRLEVTGEYMVMASQLMLIKSRKLLPKVAEVTDLGDDLEQDLLSQIEEYRKFKLLGEHLEAKHQERAQYYS-KAPTELIY--EDAELVHDKTTIDLFLAFSNILAKKKEEFAQNHTTILRDEYKIEDMMIIVKESLIGRDQLRLQDLFKEAQNVQEVITLFLATLELIKTQELILVQEESFGDIYLMEKKEESQVPQS
3W6J Chain:A ((7-168))YNVKIEAFEGPLDLLLHLINRYEIDIYDIPVAQITEQYMAYIHAMQELELDIASEYLVMAATLLAIKSKMLLPP---------DPREELTQRLLEYKKFKEAARELKRREEERALLFTKPP-SDLSAYA------LDVNVYDMLGALSKLLRRKK------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3W6J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 304 -60662 -199.55 -446.04
target 2D structure prediction score : 0.79
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -199.55
2D Compatibility (Sec. Struct. Predict.) : 0.79
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.494

(partial model without unconserved sides chains):
PDB file : Tito_3W6J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3W6J-query.scw
PDB file : Tito_Scwrl_3W6J.pdb: