Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSQKQPYTPGEFQWSFLLPKYWGVWIAITFLMLLAILPWAIQWRLAHGLANLAWKYLKSRRKTTIRNLEVCFPEWSPEKVQQQAKQVFVDMMLGIFETLNAWYKPYWFKNRV-TIEGLE---HITNAQAQGKGVL--LL-GT-HSTLLDAGGYVC-AQYFEPDV---VY-RPQNNPLLDMLIYRCRGTIYKAQIDHDDMRGLIRHLKEGDAIWYSPDQDFGLKQGVMAPFFGVPAATVTAHRRLLKISKAVAVPLYFYRHGNVQNPKYHILIEPAVDNLPSEDEVDDAT--RVNKIIENQLRIAPTQYMWFHR---RFKTRPEGYEEIY- 4RGP Chain:A ((2-256)) ------NATEQETLTILLDVY-------AYYQAYQIVKASQFFS---DDIIFLLELLKERRELNVDFLFQ-----NQVHLQELELTYHISL-------LDNAYEEELLANYIMDLEAKLRNDHIIDFVRSVSPILYRLLMRLMQSQVADINDYIYDAKNDQYDTWKFDKMHDSANPFVQNFVAKGRDS----KITSRSLADFIQLT-------------------------DLPQAIKDNILLLRDFEKSVRNPLAH-------------LIKP-----FDEEELHRTTGFSSQTFLEKIIQLAVFSGIHYDNDKFYFDKVNELIKRIYQ

General information: TITO was launched using: RESULT: Template: 4RGP.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 916 -29494 -32.20 -124.97 target 2D structure prediction score : 0.49 Monomeric hydrophicity matching model chain A : 0.63 3D Compatibility (PKB) : -32.20 2D Compatibility (Sec. Struct. Predict.) : 0.49 1D Compatibility (Hydrophobicity) : 0.63 QMean score : 0.323

(partial model without unconserved sides chains): PDB file : Tito_4RGP.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4RGP-query.scw PDB file : Tito_Scwrl_4RGP.pdb: