Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIWSI---------LCLIWTLVAYVVAKRIYQKHPKLWLSPAISVPVLTIILMTIFGISY-QTYAEDTQWIVNLL--GPATVAFAIP----IYRYRETIRKKLGVLTIAIIVGM-----SVGVMTAYKMAQWFHFS------PEVTNSLMARSISTPFAMILAEDIHGS------------------------AALVSL-----FTVITGLVGMICGDAILAITKIRSNVANGAALGNAAHGFGTVRAQQRNSEEGVIASLTMVIAGILMVLIGPFAIHL----------WLLL--------------------------------
5EQJ Chain:B ((4-376))-NCFSGYKDLIKEGDLTLIWVSRDNIKPVRMHS--EEVFNTRYGSFPHKDII-----GKPYGSQIAIRTFAFVHVLQPTPELWTLSLPTQIVYTPDSSYIMQRLNCSPHSRVIEAGTGSGSFSHAFARSVGHLFSFEFHHIRYEQALEEFKEHGLIDDNVTITHRDVCQGGFLIKKGDTTSYEFGNNETAASLNANVVFLDLPAPWDAIPHLDSVISVDEKVGLCCFSPCIEQVDKTLDVLEKYGWTDVEMVEIQGRQYESRRQMVRSLNDALERLRDIKRHIKEGDSNYKWKEVTKMEAEIKSHTSYLTFAFKVVNRSRDDEKVNE


General information:
TITO was launched using:
RESULT:

Template: 5EQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1149 -66723 -58.07 -301.91
target 2D structure prediction score : 0.31
Monomeric hydrophicity matching model chain B : 0.64

3D Compatibility (PKB) : -58.07
2D Compatibility (Sec. Struct. Predict.) : 0.31
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.087

(partial model without unconserved sides chains):
PDB file : Tito_5EQJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5EQJ-query.scw
PDB file : Tito_Scwrl_5EQJ.pdb: