Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLFDDTAVSKQLAQVRIVMVNTTLPANIGSALRAMKTMGLSKLVLVSPKTYPHPDIQALAAGAQDLLEQVEIVETLEEAIKDCHLVFGTSARSRTIPWPLLDVRPASKEAIKAAAQGQQIAIVFGREDRGLTNEELALANYHLTIPVNSDYGVLNVAQAIQVVCYELRMSVLEQKEVASDAGQMPLAQGQSMQWDE---PLVTQQQMEEFYPHLEKVLTEIEFLDPENPRLLPLRLRRLFGRIQLDRMEYHLLRGIFSRVQALTSGKWKKASSDKEDQSNA
4XBO Chain:B ((2-240))------------LQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKP-------AAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAAN-TPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQE-----------N-------ETPYPLV--DDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQN-----------------


General information:
TITO was launched using:
RESULT:

Template: 4XBO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1075 -144856 -134.75 -652.50
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain B : 0.81

3D Compatibility (PKB) : -134.75
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.623

(partial model without unconserved sides chains):
PDB file : Tito_4XBO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XBO-query.scw
PDB file : Tito_Scwrl_4XBO.pdb: