Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMCCFVVYGGVLNMSDKKTSLVICFTPLQMLIAEKIVAQQPSVDLIVIALNNNDKYKYYYNIFQHPNIAKQYYLFDNNKSRFFKFINIIKFNENFKLEKFYENIYISSIDNKYTHNILSKVNFNNLYTYDDGTANIVKNSIYFKQTFESKLKDIVLKLIGIRFNLNKIKKLSRKHYTIYKGIQNIVEQTEYVSIIEKKEEDRNIFIDQEIKIFLGQPLKDIDK---N---FDTLALKKLLV--MEEVNYHFKHPRETDE--A-FFEEIKTSYIFEDFFAKELSKYRKVIIYTLSSTAALNIISLDNVEIRLIKNNTVEIKYPDLVQLFIKSGATVIDMDSIK
5FA1 Chain:B ((220-328))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------THSAAGVVLQVEDDSNLIAYNHDFTNISLLSYVRQRYEKEDILVRAHPGSLFRLRDDVFTID-DSANSLAFIN------QCNEVFTINSSVGLEAIL-TGKKTTVL------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5FA1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 361 3228 8.94 37.10
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain B : 0.52

3D Compatibility (PKB) : 8.94
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.437

(partial model without unconserved sides chains):
PDB file : Tito_5FA1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FA1-query.scw
PDB file : Tito_Scwrl_5FA1.pdb: