Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIKKRGLAKGRGLDALLGSIQKEKLQLEAQALDHGQLKQIDVKLLKRGEYQPRRFIHEHDLQELASSIEKHGVMQPIVIRPVDDEAHPYEIIAGERRWRAAQIAGLTEIPAIVRDLNDQVAIALALIENIQRQDLNPIDQALALQRFHDEFGLSHQEIADTVGKARTTVSNLLRLLSLADDIKEFMQQGQL-DMGHARAILTLKGKEQLEVAKIVIEKGLSV-RQTEQLVRDWNEPKQEKEKAPVAPDIEQLTQKLSERFGANVKIDHNQKGKGKLVIHYHSLDELDGILNICLPD
1R71 Chain:A ((23-136))--------------------------------------------------------------------------------------------------------------------------EADQVIENLQRNELTPREIADFIGRELAK-GKKKGDIAKEIGKSPAFITQHVTLLDLPEKIADAFNTGRVRDVTVVNELVTAFKKRPEEVEAWLDDDTQEITRGTVKLLREFLDE------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1R71.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 366 -25868 -70.68 -230.96
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -70.68
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.782

(partial model without unconserved sides chains):
PDB file : Tito_1R71.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1R71-query.scw
PDB file : Tito_Scwrl_1R71.pdb: