Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLAIASALLSALAVSGAANAYQAEVGGSYNYLDPDNGSSVSKFGVDGTYYFNPVQTRNAPLAEAAFLNRASNVNAHVNYGDNSGTKDTQYGVGVEYFVPNSDFYLSGDVGRNEREIDNTNIDSKVTTYAAEVGYLPAPGLLLALGVKGYDEKDGKDGADPTVRAKYVTQVGQHDVNLEAYGAFGDLDEYKVRGDYYIDKTLSLGVDYYNNDLTDKDEFGINAKKFLNQQVSVEGRVGFGD----NDNTYGVRAAYRF
3QRA Chain:A ((115-157))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLAYGAGLQFNPHPNFVIDASYEYSKLDDVKVGTWMLGAGYRF


General information:
TITO was launched using:
RESULT:

Template: 3QRA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 99 19 0.19 0.47
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : 0.19
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.193

(partial model without unconserved sides chains):
PDB file : Tito_3QRA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QRA-query.scw
PDB file : Tito_Scwrl_3QRA.pdb: