Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNQNDKLKSLKTSSMDRRLSIAKASLLAGTRWATASASSLFSSEEEKEKKRKKAMSEQANYLVSEIGKLKGSIVKIGQMMALYGEHFLPEEITQALNTLNNQTVALNWPAIKPHLQEQLGSKLNDLTIDHEPIGTASLAQVHCATRKSDGLELVLKIQYPGVANAID-SDMSLFKNMLKLTRMVPQTREFDQWFDEVREMMHREVNYHVEAATTRRFAERLKDDERYIVPTIVDEYCTDQVLCMTFERGVPINSPVMLSLPQERRNQLGEASLEIAVREIFEWGEMQTDPNFGNYLVRLGNGQDIQDKIVLLDFGAIRQFDEHLLSVARNLIQAGYQHDKHAMVQAMTGYEFFDAMPESIKPGMADVFLLATEAFSTPANNPDMPAGLMDEHERYDWKKSQLHSRVMQQASKSMASRYFSVPPKEFMFISRKFIGAYTFMTVIDAKTNVRRMIRNFA
1GH6 Chain:B ((379-772))-MNTIQQLMMILNSASDQPSENLISYFNNCTV---NPKESILKRVKDIGYIFKEKFAKAVGAGCVAIGSQRYKLGVR--LYYRVMESMLKSEEERLSIQNFSKLLN---------------------DNIFHMSLLACALEVVMATYSRSTTDL----SFPWILNVLNLKAFDFYKVIESFIKA--------------------------EGNLTREMIKHLERCEHRIMES------------LAWLSD----SPLFDLIKQSKLVPRGSTSLSLFYKKVYRLAYLRLNTLCERLLS---EHPELEHIIWTLFQHTLQNEYELM-------------RDRH----------------------LDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYD---------SIIVFYNSVFMQR------------LKTNILQYA


General information:
TITO was launched using:
RESULT:

Template: 1GH6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1374 -84249 -61.32 -259.23
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain B : 0.60

3D Compatibility (PKB) : -61.32
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.274

(partial model without unconserved sides chains):
PDB file : Tito_1GH6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GH6-query.scw
PDB file : Tito_Scwrl_1GH6.pdb: