Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence -------------MDFNCDLVWMNSM--SALLRFTQFVQKTFAL-WVIIFAALAL--------------WQPEFFVWLKAYIPWILGIIMLGMGMTMTVDDFKG----VLQSPKAVLIGV----VAQFVVMPGLAFILCKLFN--LPPEIAVGVILVGCCP------GGTAS---------------------NVITYMAKGNVALSVACTSVSTLLAPV--------LTPAIFYLLASQWLKID---------------AASMFISILQVVLLP--IVIGLILRTWLKRQVESYIQVMPLVSVIAIVAIVAAIIGGSKAAILQSGLLILAVVILHNGLGY---------LLGFAAARFFKLPYADSKAIAV----EVGMQNSGLGVALAAVHFA---------ASPITAVPSAIFSLWHNISGPALATYWASKHKQE 1E6Y Chain:B ((1-432)) SDTVDIYDDRGKLLESNVDIMSLAPTRNAAIQSIIMDTKRSVAVNLAGIQGALASGKMGGKGRQILGRGLNYDIVGNADAIAENVKKLVQVDEGDDTNVIKVKGGKSLLIQSPKSRIIAGADFMSATTVGAAAVTQTIMDMFGTDPYDAPIVKSAVWGSYPQTMDLMGGQVQGILSIPQNNEGLGFSLRNIMANHVAAISNRNAMNASALSSIYEQSGIFEMGGAVGMFERHQLLGLAYQGLNANNLLYDIVKENGKDGTIGTVIESVVRRAIEAGIISVDKTAPSGYNFYKANDVPKWNACAAVGTLAATLVNCGAGRAAQNVSSTLLYFNDILEKETGLPGCDYGKVEGTAVGFSFFSHSIYGGGGPGVFNGNHVVTRHSRGFAIPCVCAAVALDAGTQMFSIESTSGLIGDVFGAIPEFREPIKAVAGV------

General information: TITO was launched using: RESULT: Template: 1E6Y.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1530 -121559 -79.45 -382.26 target 2D structure prediction score : 0.59 Monomeric hydrophicity matching model chain B : 0.66 3D Compatibility (PKB) : -79.45 2D Compatibility (Sec. Struct. Predict.) : 0.59 1D Compatibility (Hydrophobicity) : 0.66 QMean score : 0.254

(partial model without unconserved sides chains): PDB file : Tito_1E6Y.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1E6Y-query.scw PDB file : Tito_Scwrl_1E6Y.pdb: