Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHSQPLLDCWNLDQILDDLNAHGFAIVNQAYSAEYHTQVAKECSHH--FDEFREAGIQNG---VVSTIRSDHILWINESLPVA-EQHVETLTSFCQHLNQAFFLGIKEVEAHFACYNPGEFYALHRDNPQQKNDRIMSTVYYLHPQWQDDWGGQLRLQDKNDIWHIITPEPNRLVIFQSN-LLHEVLVSKQQRLSITAWLRSGNSIWV
4J25 Chain:F ((32-222))-----------LAAVVDDLATHGWSQQAHFLPADLVRALAAECRRRDAEGELNPAGV---TQEVRETIRGDQIQWIDPGQAEACDQYLAAMDQLRLAINQGLFLGLEDFECHFALYPPGAFYRRHLDR---DDRRMVSAVLYLNEGWQPHDGGQLRMFLADGVEHDVEPVAGCLVVFLSGEVPHEVLPAGRERLSLTGWFR-------


General information:
TITO was launched using:
RESULT:

Template: 4J25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 803 -27483 -34.23 -155.27
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain F : 0.77

3D Compatibility (PKB) : -34.23
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.393

(partial model without unconserved sides chains):
PDB file : Tito_4J25.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4J25-query.scw
PDB file : Tito_Scwrl_4J25.pdb: