Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMRIGLFLLTNLAVLVVAGIILSLFGVGSYHGAGGLNLGNLLVICFVF--GMVGSL-----VSL----------FMSKWMAKKTTGTELIDPNAPRNQAESWLLQTVAELSQRAGINMPEVG---IFPSYQSNAFATGWN-----KNDALVAVSSGLLERMNKDEL--------------------------------RAVLAHEIGH---VANGDMVTLALIQGVVNAFVMFFAR--------VVGDFIDRNVFGRQD--------NEAPGMGYFIITMVLDIV-FGILASAIVMWFSRYREYRADEAGARLAGKQAMIS-----ALLRLQAETELPDQMPKE------MKAFAIAEGKEQGFSLAALFQTHP--------TIEQRV-AALHQLDCP-----------------------
4Q6O Chain:A ((21-437))MIEKAP---TNVEDRDKAPHLLLLAGIQG-DEPGGFNATNLFLMHYSVLKGLVEVVPVLNKPSMLRNHRGLYGDMNRKFAALDKNDPEYPTIQEIKSLIAKPSIDAVLHLHDGGGYYRPVYVDAMLNPKRWGNCFIIDQDEVKGAKFPNLLAFANNTIESINAHLLHPIEEYHLKNTRTAQGDTEMQKALTFYAINQKKSAFANEASKELPLASRVFYHLQAIEGLLNQLNIPFKRDFDLNPNSVHALINDKNLWAKISSLPKMPLFNLRPKLNHFPLPHNTKIPQIPIESNAYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDPSLEEVKMQIDNKDQMVKIGSVVEVKESFYIHAMDNIRANVIGFSVSNENKPNEAGYTIKFKDFQKRFSLDKQERIYRIEFYKNNAFSGMILVKFV


General information:
TITO was launched using:
RESULT:

Template: 4Q6O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1614 -60752 -37.64 -204.55
target 2D structure prediction score : 0.35
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -37.64
2D Compatibility (Sec. Struct. Predict.) : 0.35
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.172

(partial model without unconserved sides chains):
PDB file : Tito_4Q6O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q6O-query.scw
PDB file : Tito_Scwrl_4Q6O.pdb: