Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSAFKRFVQQSPSTVKDNVFAVVAYCPINNLANADLGYEWQYNASRNDSNTGNLNGVSYSAGPQLTASKEIAEKFPMYLQTLNLKLPNGQQLTAENMPDQIKEQIKSEIERQLAKGTPVPNFGENFVSSKATLVNDWLKHDGSKVTEIDYQKFLNYVAANQALKTVVAFDAVGVNGNTAISGETNLFGDSQNEYNNFTQWSWDHNSKTADGSGQDDTGLSWENYLNSNSSTANLLKDQLKMVNPIAYLNTTTDTAPYWYIRHGVLDRDTSFAMQMILYYAVTNDPKVKDTNFKLPYLTGHAGNYDVQEAFKWINEKLNTTQ
3WI3 Chain:A ((8-275))-YSDPKEYIESKYYDALFSIHTPLAYFVKSNLVRLKNTCRTKYGSD-----------------SYKIAYQAMLQKF--LLSIVQFKDRHDNRLLLEPFSSPIADEKRKNCLTKFVIQDENKN----------------------SSTIADLCVVLK--SREIKLQILLLLEIIGLNDL---------------------DWNFRDFDYCEQLDLYLDRACILDILLSSETGTIQEHKKN-------------------------ILDKSKEASLVGFINYV------------LIPYF-----NKKVPHAVEFIIQKLKGPS


General information:
TITO was launched using:
RESULT:

Template: 3WI3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 882 -65726 -74.52 -305.70
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -74.52
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.180

(partial model without unconserved sides chains):
PDB file : Tito_3WI3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3WI3-query.scw
PDB file : Tito_Scwrl_3WI3.pdb: