Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGLNMPEPTSTTAATTTSLAAVSL------LPFI------NGNALLGAVLGAAFVA-YLEKDLSAKQRIVFMLLCVGFGY--------LLGPEITSRTQYISSDATASMVAAIFAIYILIKLLDWVKNSTLAQLWKTFRGGGNS-
1EKR Chain:A ((11-156))GEAHMVDVSAKAETVREARAEAFVTMRSETLAMIIDGRHHKGDVFATARIAGIQAAKRTWDLIPLCHPLMLSKVEVNLQAEPEHNRVRIETLCRLTGKTGVEMEALTAASVAALTIYDMCKAVQ--KDMVIGPVRLLAKSSGDFK


General information:
TITO was launched using:
RESULT:

Template: 1EKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 548 -24725 -45.12 -204.34
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -45.12
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.279

(partial model without unconserved sides chains):
PDB file : Tito_1EKR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1EKR-query.scw
PDB file : Tito_Scwrl_1EKR.pdb: