Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNGMEEHLLTQKLQQRLRFSTHIQEAQAAVLIAITNENNPKVLLTRRSIHMNNHAGEVSFPGGKRDPSDTSNIVVALREAQEETALNPFDVQLLGDLPMQRA-RSGLSVKPIVGLIPPEVTLI-PQPTEIDRIFFVPLQQLIEMRPTPYEVRYAHQSLYFPSLQIDNEIIWGLTAQMLIALFKYGLGYQKEWPFLLNAPTFGMPKFSHKK
1SJY Chain:A ((11-157))------------------------VELRAAGVVLLNE-RGDILLVQEKGI--EKAGLWHIPSGAVEDGEN-PQDAAVREACEETGLRVRPVKFLGAYLGRFPDGVLILRHVWLAEPEPGQTLAPAFTDEIAEASFVSREDFAQLYAAGQI-R----MYQTKLFYADALREKGFPAL----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1SJY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 683 -35213 -51.56 -249.73
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -51.56
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.386

(partial model without unconserved sides chains):
PDB file : Tito_1SJY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SJY-query.scw
PDB file : Tito_Scwrl_1SJY.pdb: