Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGRFKSTLDVKCPTKEIAMLDEIKMIESVAPDIIEVLQERYKILRNIYWMQPIGRRSLSESMGITERVLRTETDLLKNLNLIDTSKSGMTLTTKGEEVYQSLENFMDQLLGTHQTEQQLAEYFGNQRCIVVSGNSEEQTKVADAFGEALSEALDRLLPEGENIIAVMGGTTMAVVAEQLSNLENKKRHNLFVPARGGIGEAITVQANSVSARMAAKANGNHRALYVPEQLSLATYNSLLNEPSIQEVLNLISEANCVIHSIGRALHMAARRKMTEKELVMLKQANAVAESFGYFFNEKGEVVYKVPRIGIELQDLEKVPIIMAIAGGKSKAKAIRAYMKNAPKQTWLITDEAAANEILKGVTL
3BXF Chain:B ((9-253))---------------------------------------------------------------------------------------------------------------LTLLEKTLKERLNLKDAIIVSGDSDQSPWVKKEMGRAAVACMKKRF-SGKNIVAVTGGTTIEAVAEMMTP-DSKNRELLFVPARGGLGEDVKNQANTICAHMAEKASGTYRLLFVPGQLSQGAYSSIIEEPSVKEVLNTIKSASMLVHGIGEAKTMAQRRNTPLEDLKKIDDNDAVTEAFGYYFNADGEVVHKVHSVGMQLDDIDAIPDIIAVAGGSSKAEAIEAYFKK-PRNTVLVTDEGAAKKLLR----


General information:
TITO was launched using:
RESULT:

Template: 3BXF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1450 -151680 -104.61 -619.10
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.73

3D Compatibility (PKB) : -104.61
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.550

(partial model without unconserved sides chains):
PDB file : Tito_3BXF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BXF-query.scw
PDB file : Tito_Scwrl_3BXF.pdb: