Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKSKGLGRGIDALFQDLENLETVDVKDDTVVQLPLNELRPNPYQPRKTFEEVSLQELANSIEQSGVFQPIIVRRSAVKGYEIIAGERRFRASKLAEKETIPAIVRDFDEEAMMQVAVLENLQREDLNPLEEAEAYEMLMKNLKLTQAEVASRLGKSRPYIANYLRLLSLPDLVKEMVQDQRLS-MGQARTLLGLKNKTLILKLANRAVTENLTV-RQLEQLVSELNQNDGKEKKKIPRLAKEKPYYIRESEDRLMDKFGTSVAIQEKNGKGKIEIEYLSQKDLTRILDILNIQFDEE
1R71 Chain:A ((23-136))-----------------------------------------------------------------------------------------------------------------EADQVIENLQRNELTPREIADFIGRELAK-GKKKGDIAKEIGKSPAFITQHVTLLDLPEKIADAFNTGRVRDVTVVNELVTAFKKR-PEEVEAWLDDDTQEITRGTVKLLREFLDE---------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1R71.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 366 -23795 -65.01 -212.46
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -65.01
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.687

(partial model without unconserved sides chains):
PDB file : Tito_1R71.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1R71-query.scw
PDB file : Tito_Scwrl_1R71.pdb: